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Sara Mostafavi

Machine Learning For Computational Biology (MLCB) Integrative Genomics Gene Function Prediction Computational Biology Large-Scale Genomics Data Integration

About

Sara Mostafavi is an Associate Professor at the Paul Allen School of Computer Science & Engineering at the University of Washington (UW). She is also a co-founder of the Machine Learning for Computational Biology (MLCB) Conference. Before joining UW, Mostafavi was an Assistant Professor at the Department of Statistics and the Department of Medical Genetics at University of British Columbia (UBC), and a faculty member at the Vector Institute. She was the recipient of a Canada Research Chair (CRC II) in Computational Biology (2015-2020), and a Canada CIFAR Chair in Artificial Intelligence (CIFAR-AI). Before UBC, Mostafavi did a postdoc at Stanford CS working with Daphne Koller. She got her Ph.D. in Computer Science from the University of Toronto in 2011, working with Quaid Morris. Her Ph.D. thesis developed machine learning methods for integrating large-scale genomics datasets to predict gene function.

Research Performance Summary

186
Total Papers
45724
Total Citations
64
H-Index
2006-2025
Active Research Span

First Recorded Paper

A COMPREHENSIVE COMPUTATIONAL, FRAMEWORK

Year: 2006

Citations: 0

Venue: N/A

Latest Recorded Paper

Investigating Data Size, Sequence Diversity, and Model Complexity in MPRA-based Sequence-to-Function Prediction

Year: 2025

Citations: 0

Venue: bioRxiv, 2025.03. 11.642630

Last 10 Years Publication Activity

This timeline shows the professor's yearly publication activity.

2025
11
2024
10
2023
12
2022
10
2021
17
2020
28
2019
18
2018
19
2017
16
2016
10
2015
7

Publication Venues and Collaboration

Journal, Conference, and Book Publication Breakdown

Conference 5
Journal 19
Book 0

Top Coauthors

Mostafavi Gaiteri

Research Impact by Period

2025-2026

Period Stats
Papers 11
Citations 26
Avg. Citations / Paper 2.4
H-Index 3

2020-2024

Period Stats
Papers 77
Citations 4705
Avg. Citations / Paper 61.1
H-Index 32

2015-2019

Period Stats
Papers 70
Citations 19196
Avg. Citations / Paper 274.2
H-Index 33

2010-2014

Period Stats
Papers 23
Citations 20244
Avg. Citations / Paper 880.2
H-Index 18

2005-2009

Period Stats
Papers 5
Citations 1553
Avg. Citations / Paper 310.6
H-Index 3

Contact and Professional Links

Contact Information

saramos@cs.washington.edu

Detected Research Keywords

Major Depressive Disorder Genome Wide Association Predicting Gene Function Human Brain Transcriptome Wide Association Study Graft Versus Host Versus Host Disease Wide Association Analyses Droplet Single Cell Single Cell Rna