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Alexander J. Hartemink

Computational Biology Bioinformatics Advanced Genomic Technologies Quantitative Biodesign

About

I am a Professor of Computer Science and Biology at Duke University. I previously directed the Graduate Program in Computational Biology and Bioinformatics, and I am a member of the Center for Advanced Genomic Technologies and the Center for Quantitative Biodesign. I served for many years as the faculty director of the Office of University Scholars and Fellows. I have been at Duke since September 2001, when I received my Ph.D. from the Department of Electrical Engineering and Computer Science at the Massachusetts Institute of Technology under the supervision of David Gifford, Tommi Jaakkola, and Rick Young

Research Performance Summary

102
Total Papers
13537
Total Citations
50
H-Index
1997-2026
Active Research Span

First Recorded Paper

Thermodynamic simulation of deoxyoligonucleotide hybridization for DNA computation

Year: 1997

Citations: 65

Venue: Proceedings of the Third Annual DIMACS Workshop on DNA Based Computers 48

Latest Recorded Paper

Comprehensive profiling of chromatin occupancy dynamics through the cell cycle

Year: 2026

Citations: 0

Venue: Nucleic Acids Research 54 (2), gkaf1385

Last 10 Years Publication Activity

This timeline shows the professor's yearly publication activity.

2026
2
2025
1
2024
1
2023
1
2022
1
2021
4
2020
1
2018
1
2017
3
2016
5
2015
2

Publication Venues and Collaboration

Journal, Conference, and Book Publication Breakdown

Conference 31
Journal 6
Book 1

Top Coauthors

Hartemink MacAlpine

Research Impact by Period

2025-2026

Period Stats
Papers 3
Citations 1
Avg. Citations / Paper 0.3
H-Index 1

2020-2024

Period Stats
Papers 8
Citations 111
Avg. Citations / Paper 13.9
H-Index 7

2015-2019

Period Stats
Papers 11
Citations 797
Avg. Citations / Paper 72.5
H-Index 7

2010-2014

Period Stats
Papers 20
Citations 4687
Avg. Citations / Paper 234.3
H-Index 15

2005-2009

Period Stats
Papers 33
Citations 4325
Avg. Citations / Paper 131.1
H-Index 21

2000-2004

Period Stats
Papers 22
Citations 3290
Avg. Citations / Paper 149.5
H-Index 15

1995-1999

Period Stats
Papers 5
Citations 326
Avg. Citations / Paper 65.2
H-Index 4

Contact and Professional Links

Contact Information

amink@cs.duke.edu
9196606514

Detected Research Keywords

Genetic Regulatory Networks Transcription Factor Binding Cancer Diagnosis Gene Diagnosis Gene Expression Chromatin Accessibility Data Structure Sequence Function Bayesian Network Inference Discovery Genetic Regulatory Regulatory Network Models Cell Cycle Transcription